PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK31601.1
Organism
Arabis alpina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family ERF
Protein Properties Length: 173aa    MW: 20031.4 Da    PI: 11.1556
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK31601.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.21.9e-0831632655
         AP2 26 g...krkrfslgkfgtaeeAakaaiaarkkleg 55
                g   +r r++lg+f + eeAaka++  +k+ +g
  KFK31601.1 31 GykgIRSRVWLGTFNSTEEAAKAYDLEAKRTRG 63
                4534569**********************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.4E-51177IPR001471AP2/ERF domain
PROSITE profilePS5103212.5361771IPR001471AP2/ERF domain
CDDcd000185.62E-123370No hitNo description
PfamPF008479.8E-53563IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-133670IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-93672IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MNLELKFVLL LFRINRSMNG ADVRKKKMSS GYKGIRSRVW LGTFNSTEEA AKAYDLEAKR  60
TRGAKAKLNF YCSLSLLPFR NVSRSFKSPR CAVDSPYGGN VPVFPRTRVW DPYKRLGIRL  120
YASKEEIWAS RNFLSWRKEV SPIVLITNKI VSRRNNIVAF DFSFFSLVLS CFH
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK31601.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A087GNZ91e-122A0A087GNZ9_ARAAL; Uncharacterized protein
STRINGA0A087GNZ91e-123(Arabis alpina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.25e-16ERF family protein