PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK36193.1
Organism
Arabis alpina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family ERF
Protein Properties Length: 171aa    MW: 18613.4 Da    PI: 4.2294
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK36193.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.4e-192575155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr ++ +g+Wv+eIr p++   ++r++lg++ tae Aa+a++aa ++l+g
  KFK36193.1 25 KKYKGVRMRS-WGSWVSEIRAPNQ---NTRIWLGSYSTAEAAARAYDAALLCLKG 75
                59*****998.**********944...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.03E-142579No hitNo description
SuperFamilySSF541711.44E-162677IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.5E-252677IPR001471AP2/ERF domain
SMARTSM003803.9E-282693IPR001471AP2/ERF domain
PROSITE profilePS5103220.1122687IPR001471AP2/ERF domain
PfamPF008479.1E-122675IPR001471AP2/ERF domain
PRINTSPR003673.5E-92738IPR001471AP2/ERF domain
PRINTSPR003673.5E-94965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009861Biological Processjasmonic acid and ethylene-dependent systemic resistance
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0045088Biological Processregulation of innate immune response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1900030Biological Processregulation of pectin biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MSSSSSSSIS TSSSSTSSTS KINMKKYKGV RMRSWGSWVS EIRAPNQNTR IWLGSYSTAE  60
AAARAYDAAL LCLKGSSRVA AAAANTDPSS SSASTSSPLM LSSPSEDLYD AASMSQYDQQ  120
VSLSESSWYN CFDGDDDQFM FINGLSVQYL TIPPVDDFFE EGDEIRLWNF C
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00185DAPTransfer from AT1G44830Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK36193.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010461454.14e-56PREDICTED: ethylene-responsive transcription factor ERF014-like
SwissprotQ9LPE82e-55ERF14_ARATH; Ethylene-responsive transcription factor ERF014
TrEMBLA0A087H2411e-119A0A087H241_ARAAL; Uncharacterized protein
STRINGA0A087H2411e-120(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144091822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.17e-30ERF family protein
Publications ? help Back to Top
  1. Zhang H,Hong Y,Huang L,Li D,Song F
    Arabidopsis AtERF014 acts as a dual regulator that differentially modulates immunity against Pseudomonas syringae pv. tomato and Botrytis cinerea.
    Sci Rep, 2016. 6: p. 30251
    [PMID:27445230]