PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK36348.1
Organism
Arabis alpina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family GeBP
Protein Properties Length: 779aa    MW: 90084.8 Da    PI: 4.4315
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK36348.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573102.34e-3244139398
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 ++++w+ + e+++L G++d++++++ s+ dd+da+y+f+k+si++k+sk+ql++Kir LKk+f +++ k+++gk psf++++d++if+ls++iWg+
  KFK36348.1  44 SKMIWTRNNELIILAGIVDYESEKELSYNDDWDALYNFIKGSIELKFSKKQLIDKIRGLKKRFMDNMVKSEDGKGPSFTNTEDDEIFKLSMIIWGT 139
                 789*******************************************************************************************95 PP
2DUF573842.1e-26475564498
      DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 +  w+++De  +L+G+++++++t+  + +d+daf+ f+k+si   ++k+ql +Kir+LKk+f+++ +k      psf++++d+++f+ls+ iWg+
  KFK36348.1 475 KITWTKDDEHHILKGIVKYEDETELRYRADWDAFCAFIKDSIVTIFTKEQLQSKIRKLKKRFTDNLAK-----GPSFTNSDDEEMFKLSMVIWGK 564
                 557****************************************************************9.....89******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.0E-2545138IPR007592Protein of unknown function DUF573
PfamPF045045.9E-21477563IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 779 aa     Download sequence    Send to blast
MPLSSPIKRK HVDDDNEEVS GTKSRLRSRK ILKTTFLSPS SSSSKMIWTR NNELIILAGI  60
VDYESEKELS YNDDWDALYN FIKGSIELKF SKKQLIDKIR GLKKRFMDNM VKSEDGKGPS  120
FTNTEDDEIF KLSMIIWGTK SEKEFGSNEN LEQGKDVTNA DHEKINENMD QAKDVDVPYA  180
EHERISENVD QAKVDVSDAE NERVNENMDI AKDVSCAEHD QVNESVGQAK VNKDVSYADH  240
DQVNESMDQA KEDVSSEEQE RVNESVDQAK TDVEHERVSN ISMEIDDDGE KEKKSKEDGV  300
DEFCALQDAF EALLFPRFGK THQKLLLHNL KNLKAEKRRE LSDEWKALLA EEVQLHIKKL  360
TFSTKLANTL VSAQYRVNKT KARFFFTLHK ISKILQKFPS LIMGSIDSDD SNTDCFEIRY  420
NDRATASSSQ RTRKRVVVDE EDEEEVSDKE TKLIRKRPRR TTTTTTTLVT SPTPKITWTK  480
DDEHHILKGI VKYEDETELR YRADWDAFCA FIKDSIVTIF TKEQLQSKIR KLKKRFTDNL  540
AKGPSFTNSD DEEMFKLSMV IWGKNNETEC DTNVNMDQSK DLALVENEQN NENVEHEQMM  600
ENDLALVENE QNNENVEHEQ MMENVEQGKE DLTNVEDEQI TENVAQEEDA TYVEDEHITE  660
NMAQEEDLTN VEQDQRNVNV EQAEDATHVE REQINENVEQ VMVDDGEKVG EEEFCLLQDA  720
FEMTLFPKLD QAHQKLLLQN LRNMKADKGK ELCEEWNELL LEEIRFNINK VTYAAKLSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1332338LKAEKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK36348.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A087H2J60.0A0A087H2J6_ARAAL; Uncharacterized protein
STRINGA0A087H2J50.0(Arabis alpina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36340.13e-60DNA-binding storekeeper protein-related transcriptional regulator