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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
KFK38790.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
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| Family |
Trihelix |
| Protein Properties |
Length: 329aa MW: 36680 Da PI: 8.2309 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK38790.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 45.8 | 1.6e-14 | 72 | 158 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+++ + Li+a e+ +l+rg+lk+++W++v++ + ++ +++ s +qCk++++ ++k++k++k+ + ++ s++++f++l+
KFK38790.1 72 CWSEEATEILIDAWGERFMELKRGNLKQQHWKQVAEIVNSERINKsvkSDIQCKNRIDTVKKKFKQEKAKIVST--GENSKWVFFNKLQ 158
7*************************************7777665223788********************994..55559******97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MDEDDETQSR PSPENSLSPD PPIGVTTTTA KSSASSPSPR DGLALMVSPP NRTRSGGRRR 60
SGGGGGGGRD DCWSEEATEI LIDAWGERFM ELKRGNLKQQ HWKQVAEIVN SERINKSVKS 120
DIQCKNRIDT VKKKFKQEKA KIVSTGENSK WVFFNKLQHL IGEATTTTTL SKKGLMVTPS 180
LQQKRQGGVK RSSGGASSAR WHFRKRVASE TESESEPDLS GDDDSLPPPL LLSPVVDKSG 240
GGNEIGEVVM AILGFAESYE KAESLKIKQM VEIEKERMKF AKELELQRME FFKNQLEMFR 300
NVQDDEDEDG ERRSKRSHHS VKDNGNVRD
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription repressor that binds specific DNA sequence such as the GT-box-like motif 5'-CGTGATT-3' in the AT2S3 promoter. Negative regulator of seed maturation genes during seed germination and seedling development. May target GT-box-containing embryonic genes by competing with the binding of transcriptional activators to this promoter region (PubMed:19155348). Contributes to the maintenance and control of seed filling (PubMed:22231199) and may repress the maturation program during early embryogenesis (PubMed:21330492). {ECO:0000269|PubMed:19155348, ECO:0000269|PubMed:21330492, ECO:0000269|PubMed:22231199}. |
