PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHM99651.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 158aa    MW: 18369.9 Da    PI: 9.444
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHM99651.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1301.1e-0968111346
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                 + k  rr+++N eAAr+sR+RKka++++Le    +L++  ++L+
  KHM99651.1  68 DQKTLRRLAQNCEAARKSRLRKKAYQQQLESSRLKLTQLEQELQ 111
                 568899************************98877777665443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-862116No hitNo description
SMARTSM003380.00166130IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.57768112IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.84E-670117No hitNo description
PfamPF001704.5E-770111IPR004827Basic-leucine zipper domain
PROSITE patternPS0003607388IPR004827Basic-leucine zipper domain
PfamPF004648.4E-12108153IPR001085Serine hydroxymethyltransferase
SuperFamilySSF533832.62E-7114152IPR015424Pyridoxal phosphate-dependent transferase
Gene3DG3DSA:3.90.1150.102.3E-7121150IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016740Molecular Functiontransferase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MEATNVHPSR ISEFGTLDQS LGFRVEDTNC LNLSYIQKHA YFYSKIWCFI VFWQSERCES  60
SGSKDKSDQK TLRRLAQNCE AARKSRLRKK AYQQQLESSR LKLTQLEQEL QRARQQVLYD  120
YEDKINQAVF PGLQGGPYNH TIIGLTVALK PVCRRISC
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHM99651.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0967340.0BT096734.1 Soybean clone JCVI-FLGm-21I11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237631.21e-109bZIP transcription factor bZIP94
TrEMBLA0A0R0IG251e-107A0A0R0IG25_SOYBN; Uncharacterized protein
STRINGGLYMA13G33480.31e-103(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1971945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.36e-17TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]