PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHM99669.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 228aa    MW: 25863.1 Da    PI: 7.707
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHM99669.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.39.8e-301871255
     G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                prlrWtpeLHe Fve+ve LGG++kAtPk+il++m+vkgL ++h+kSHLQ+YR 
  KHM99669.1 18 PRLRWTPELHEYFVEVVEGLGGKNKATPKSILHMMHVKGLRISHIKSHLQMYRN 71
                9****************************************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.7E-271472IPR009057Homeodomain-like
SuperFamilySSF466893.23E-141671IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-221772IPR006447Myb domain, plants
PfamPF002491.4E-71970IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MKNSKKTCAR KYHKSENPRL RWTPELHEYF VEVVEGLGGK NKATPKSILH MMHVKGLRIS  60
HIKSHLQMYR NMKGGTILTS MQQEMEENVH VNDHHPICSN CSSQSIIFRS QGTKFKLKAS  120
KYDTGIVNQE IHPLENKGLS QTSETDYDLN QEPESSACLF SDSSNEEKSR TMKFLDLSLS  180
FGSSPIPTMD GDQERMRFSS PNTADNHVID SNSVQSHGSN YINLDLTI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-181973458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-181973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-181973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-181973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-181973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-181973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-181973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-181973458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHM99669.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028247156.11e-170probable transcription factor KAN4
TrEMBLA0A445JMG11e-169A0A445JMG1_GLYSO; Putative Myb family transcription factor
STRINGGLYMA08G41735.11e-169(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91862839
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42660.12e-24G2-like family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]