PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN00414.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 205aa    MW: 23242.1 Da    PI: 10.8822
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN00414.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.6e-104793354
                HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                ++h+e+E+rRR riN  +e+Lr +lP+        K +Ka++L ++++ +k+L
  KHN00414.1 47 KKHSEAEKRRRMRINGQYETLRNILPNiI------KKDKASVLAETIKQVKEL 93
                68*************************55......899999999999988887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.2724493IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.16E-74798No hitNo description
PfamPF000102.2E-74793IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-1348105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-1348105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-85099IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00131137198No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MQHVRNYYNS EPQMMRSSFS QPFISRTYKT SFLKPKSKAE IKVLAAKKHS EAEKRRRMRI  60
NGQYETLRNI LPNIIKKDKA SVLAETIKQV KELKKKVSKL EQDSSTNPSK DVVKFPSGAE  120
KLRLERCNIE EGLVKATLSC EDRPELMQLI SKAVGSANTK LVKAEIVSVG GRTRSVLWVQ  180
GLGNDGMGML KSHLRTALHK PRSFQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN00414.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028183600.11e-150transcription factor bHLH131-like
TrEMBLA0A445LJE91e-149A0A445LJE9_GLYSO; Transcription factor bHLH131
STRINGGLYMA02G04650.21e-149(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126113032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.18e-38bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]