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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KHN00812.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
GRAS |
| Protein Properties |
Length: 402aa MW: 45725 Da PI: 6.4353 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KHN00812.1 | genome | TCUHK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 306.7 | 5.5e-94 | 21 | 400 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99
l++lLl+ A+av+++++ + La l +++s +gd++qR++ayf+ +L+arl+ s y+ l ++t+ +ee+ +++ ++ vsP+++f+h+taN
KHN00812.1 21 LIHLLLSTATAVDDNNMDSSLENLADLYQTVSITGDSVQRVVAYFVDGLSARLLTRKSPFYDMLMEEPTT----EEEFLSFTDLYRVSPYFQFAHFTAN 115
689****************************************************9*****999998887....5667777889*************** PP
GRAS 100 qaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelg.vpfefnvlvakrledle 190
qaIlea+e+e +++H+iDfd+s+G+QWp+L+q+L++++ ++ slRiTg+g+ + +el+et++rL +f + +g + fef+ l l +
KHN00812.1 116 QAILEAFEKEeernnRALHVIDFDVSYGFQWPSLIQSLSEKAtsGNRISLRITGFGK----NLKELQETESRLVNFSKGFGsLVFEFQGL----LRGSR 206
********9988877789**********************99755566*********....99****************97689*****8....77778 PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
+ +Lr k++E++aVnlv l +l + + ++++L +v sl+P +vvvveqe +++ sFl rf+++l+y++a+fdsl+ lp es er +E++l
KHN00812.1 207 VINLRKKKNETVAVNLVSYLNTLS----CFMK-ISDTLGFVHSLNPSIVVVVEQEGSRSPRSFLSRFTDSLHYFAAMFDSLDDCLPLESAERLRIEKKL 300
899***************999997....3333.578*************************************************************** PP
GRAS 290 lgreivnvvacegae..rrerhetlekWrerleeaGFkpvplsekaakqaklllrkv........ksdg...yrveee.sgslv.lgWkdrpLvsvSaW 373
lg+ei++++ + + + e++e+W++r+e+ GF + ++s+k + qaklll++ +++g +rv e+ +g ++ lgW++r L++vSaW
KHN00812.1 301 LGKEIKSMLNNDVDGgvDCPKYERMETWKARMENHGFVATKISSKSMIQAKLLLKMRthycplqfEEEGgggFRVSERdEGRAIsLGWQNRFLLTVSAW 399
*********9986663356799********************************9852222221122223348887664555557************** PP
GRAS 374 r 374
+
KHN00812.1 400 Q 400
6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MLRQDHHRRK GVVEDGNGLP LIHLLLSTAT AVDDNNMDSS LENLADLYQT VSITGDSVQR 60
VVAYFVDGLS ARLLTRKSPF YDMLMEEPTT EEEFLSFTDL YRVSPYFQFA HFTANQAILE 120
AFEKEEERNN RALHVIDFDV SYGFQWPSLI QSLSEKATSG NRISLRITGF GKNLKELQET 180
ESRLVNFSKG FGSLVFEFQG LLRGSRVINL RKKKNETVAV NLVSYLNTLS CFMKISDTLG 240
FVHSLNPSIV VVVEQEGSRS PRSFLSRFTD SLHYFAAMFD SLDDCLPLES AERLRIEKKL 300
LGKEIKSMLN NDVDGGVDCP KYERMETWKA RMENHGFVAT KISSKSMIQA KLLLKMRTHY 360
CPLQFEEEGG GGFRVSERDE GRAISLGWQN RFLLTVSAWQ SV
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
