PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN01144.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 102aa    MW: 11534.2 Da    PI: 5.845
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN01144.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000323322255
                HHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 22 eLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 L++++P +    +k   Ka +L + ++YI+sLq
  KHN01144.1  3 ILQDIVPGC----NKVIGKALVLDEIINYIQSLQ 32
                699999999....66699***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.578131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.5E-11249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-10248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
MKILQDIVPG CNKVIGKALV LDEIINYIQS LQRQVEFLSM KLEAVNSRLA PRIEVFPPKD  60
FDQQTFDTTG MPFASQATRE YSRGSSPEWL HMQVGGGYER AT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that may regulate jasmonate-regulated genes. {ECO:0000250|UniProtKB:Q69WS3}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN01144.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014628143.12e-70transcription factor BHLH094
RefseqXP_028230344.18e-71transcription factor BHLH094-like
SwissprotQ84T083e-47BH089_ORYSJ; Transcription factor BHLH089
TrEMBLA0A445LYH72e-69A0A445LYH7_GLYSO; Transcription factor BHLH094 isoform A
TrEMBLA0A445LYI85e-70A0A445LYI8_GLYSO; Transcription factor BHLH094 isoform B
TrEMBLI1J5H62e-69I1J5H6_SOYBN; Uncharacterized protein
STRINGGLYMA01G04610.33e-70(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.18e-58BIG PETAL P
Publications ? help Back to Top
  1. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  2. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]