PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN01733.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 168aa    MW: 19648 Da    PI: 10.9511
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN01733.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.56.7e-0961119563
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 ++ rr+++NRe+ArrsR RK+  +e+L++   +   eN++L ++l+    +  +l++e+
  KHN01733.1  61 RKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELSNRLQFVLHHLNRLRTEN 119
                 6789**************************************99987766666666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.4E-955116No hitNo description
SMARTSM003382.1E-1157121IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.46159122IPR004827Basic-leucine zipper domain
PfamPF001701.9E-660119IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-1061112No hitNo description
CDDcd147024.85E-1662113No hitNo description
PROSITE patternPS0003606479IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000165Biological ProcessMAPK cascade
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005622Cellular Componentintracellular
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004707Molecular FunctionMAP kinase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MLSLPPSDPF STFSAGFTPW DHDEDSHALF SPKPVSSSSG SDDKSEPNQH VSASSTAMEE  60
RKRRRMISNR ESARRSRMRK QRHLENLRNQ LNKCRVENRE LSNRLQFVLH HLNRLRTENE  120
WLHSERTLLR QKVANLTQIL IFQQFQTFSP AWTCTNNNTS LMTINQVN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16064RKRRR
27380RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN01733.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311420.0KT031142.1 Glycine max clone HN_CCL_140 BZIP transcription factor (Glyma17g17100.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014624888.11e-121basic leucine zipper 4
RefseqXP_028209589.11e-121basic leucine zipper 4-like
TrEMBLA0A445G7F71e-119A0A445G7F7_GLYSO; BZIP transcription factor 2
TrEMBLI1MVI71e-119I1MVI7_SOYBN; BZIP transcription factor
STRINGGLYMA17G17100.11e-120(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37730.13e-22basic leucine-zipper 7
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]