PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN03881.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family MYB_related
Protein Properties Length: 171aa    MW: 19158.1 Da    PI: 6.629
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN03881.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.61.2e-073272348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                      W++Ia++++ gRt++++k+ w+++l
       KHN03881.1  3 EWSAIAAKFP-GRTDNEIKNVWHTHL 27
                     3*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001673.37E-5127No hitNo description
PROSITE profilePS5129415.064131IPR017930Myb domain
SuperFamilySSF466895.38E-7232IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.5E-11328IPR009057Homeodomain-like
PfamPF002491.2E-5327IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MKEWSAIAAK FPGRTDNEIK NVWHTHLKKR LPQQAKQKQQ QKLSSLDTLN SKQQPVNLPT  60
EEKKPLSPPQ CVSSSMSTLT TSSDTTTNEH NSNHHHVPMM NNSTTAPESL DDDFWSQVLS  120
ADNNNSDATT SFPATGTAAD GKFQGVHPSS VYNNVDYWFD VYMGAQEFQK F
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN03881.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028182497.11e-121transcription factor MYB30-like
TrEMBLA0A445IHE51e-120A0A445IHE5_GLYSO; Transcription factor MYB30
STRINGXP_007144899.11e-44(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2236644
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.15e-13myb domain protein 14
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]