PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN06125.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family FAR1
Protein Properties Length: 164aa    MW: 19042.5 Da    PI: 3.7443
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN06125.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.62e-08115159146
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekk 46 
                 +fY+ YAk  GFsvr+s+  ++ +  e+ ++tfvCs+ g+r+ +++
  KHN06125.1 115 QFYCWYAKISGFSVRNSHIVRN-TCMETLQQTFVCSCAGYRRFSTS 159
                 6*****************9999.66679***********9987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.0E-6115159IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MHEVGDDLDD IMSELESTDN FRSFVNGDGD NDVTEVYEND DDDQHDVRVE DEEEVDSELQ  60
NDDDGDYDDF WIPGLSKEEC ISIDSMVDIR QFDMKEISDE VVGRLDFGDL ELAYQFYCWY  120
AKISGFSVRN SHIVRNTCME TLQQTFVCSC AGYRRFSTSD TRIR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN06125.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2352100.0AC235210.1 Glycine max strain Williams 82 clone GM_WBb0019I19, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028196602.11e-57protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A0B2P9T81e-115A0A0B2P9T8_GLYSO; Uncharacterized protein
STRINGGLYMA06G24610.24e-74(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3265734
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]