PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN07022.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 238aa    MW: 26947.7 Da    PI: 8.0549
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN07022.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.81.1e-2365124158
                 ---SS-EEEEEEE--.TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   1 ldDgynWrKYGqKev.kgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                 ++Dgy+ +KYGqK+v k+++ pr+YY+C  a +Cpvkk+v+rs +d+++++ tYeg+Hnh
  KHN07022.1  65 VKDGYQCKKYGQKKVtKDNPSPRAYYKCYLApSCPVKKRVQRSLQDKSFLVATYEGKHNH 124
                 58**********998689**********9999**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.0E-2358125IPR003657WRKY domain
PROSITE profilePS5081120.9260127IPR003657WRKY domain
SuperFamilySSF1182903.66E-1962126IPR003657WRKY domain
SMARTSM007747.4E-2165126IPR003657WRKY domain
PfamPF031061.4E-1866124IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MLETLSSKCE KLQSHLQEIN NEEQEVSTKS DQSGSVLLAR AEFPIAQKPS QIFVKTHPKD  60
NSLMVKDGYQ CKKYGQKKVT KDNPSPRAYY KCYLAPSCPV KKRVQRSLQD KSFLVATYEG  120
KHNHGVFRDL LKPSSSIPET SIMDNYLPMT VMPNDKLDTM NIDLCLCNRA QTDIRRCDDI  180
KEQNDRGSNS KIEEYVSSPV KDPDFIMPLA EAVVHSLNSQ SYKQVGLNLS LGLPEPHH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-17641241371WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN07022.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028235170.11e-178probable WRKY transcription factor 40
TrEMBLA0A445K5M61e-177A0A445K5M6_GLYSO; Putative WRKY transcription factor 40
STRINGGLYMA06G23990.21e-140(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73983044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-36WRKY DNA-binding protein 40
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]