PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN07208.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 91aa    MW: 10619.9 Da    PI: 7.2625
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN07208.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.16.5e-0816571455
                HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                ++iN+  ++L+ llP+ + + ++ + s + iL++++ +I+ Lq
  KHN07208.1 16 NEINELVSRLQVLLPQvN-QRGNSRQSASKILQETCCHIRRLQ 57
                58**************66.9999*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.026256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-81669IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-81670IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.2E-51657IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MSGQRRSSRA SKFTENEINE LVSRLQVLLP QVNQRGNSRQ SASKILQETC CHIRRLQEEV  60
EQLSERLSEI LDSADISDID RRTLQNFLQQ Y
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN07208.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027351279.15e-49transcription factor PRE4-like
TrEMBLA0A0B2PI033e-57A0A0B2PI03_GLYSO; Transcription factor ILI7
TrEMBLK7LAU23e-57K7LAU2_SOYBN; Uncharacterized protein
STRINGGLYMA08G47171.15e-58(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106242439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.11e-18bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]