PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN07348.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 140aa    MW: 16505.5 Da    PI: 9.1997
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN07348.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH154.5e-0526501032
                HHHHHHHHHHHHHHHCTSCC.C... CS
         HLH 10 rrRRdriNsafeeLrellPk.as.k 32
                r+RR+++N++++ L +++P+ +   
  KHN07348.1 26 RNRRKKLNERLFVLGSVVPNiSKhL 50
                9******************966343 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.22E-52565IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-42649IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MMRPCRVLQL VSLHWWAYKE ILLPKRNRRK KLNERLFVLG SVVPNISKHL QEQEKIIQAE  60
IMELELGIPK KCASYDFELE QLPVVLWSNK KITEHLYDSQ KDTDTVVKLC EVFESLKVKI  120
VTANITSFSD RLLKTSFIEF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN07348.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027356216.12e-47transcription factor bHLH35-like isoform X1
SwissprotQ2HIV92e-20BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A371G9463e-46A0A371G946_MUCPR; Transcription factor bHLH35
STRINGGLYMA09G06770.11e-46(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.32e-15bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]