PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN09257.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family NAC
Protein Properties Length: 302aa    MW: 34867 Da    PI: 8.5705
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN09257.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM152.81.5e-47191462128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 
                  pGfrFhPt+eel+++yLk+ v gkkl+  +vi  ++iy+++PwdLp  +k +e+ewyfF++rdkk+ +g r+nr+t++g+Wkatg+d+++++    ++
  KHN09257.1  19 LPGFRFHPTEEELLDFYLKNMVVGKKLRY-DVIGFLNIYQHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLsdPKR 116
                 69**************************9.99***************8888899*************************************98766677 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  +gl+ktLvfy+grap+g ktdWvm+eyrl
  KHN09257.1 117 IIGLRKTLVFYQGRAPRGCKTDWVMNEYRL 146
                 8***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.92E-5615164IPR003441NAC domain
PROSITE profilePS5100554.20118164IPR003441NAC domain
PfamPF023652.9E-2520146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MINMATMEDM SNMSGEITLP GFRFHPTEEE LLDFYLKNMV VGKKLRYDVI GFLNIYQHDP  60
WDLPGLAKVG EREWYFFVPR DKKHGSGGRP NRTTEKGFWK ATGSDRKIVT LSDPKRIIGL  120
RKTLVFYQGR APRGCKTDWV MNEYRLPDNC KLPKEIVLCK IYRKATSLKV LEQRAALEEE  180
REKKQMVDNS PASPPSSTDT MSFSSPQEEQ NVPLPLLQHV LKKESETTED MVVSKQEKTT  240
NQLTLKDTKS TCGTSLQMPF GKEKLPDLQL PMLSDWTQDT FWAQLNSPWL QNFTPTNILN  300
FY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-4571643168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN09257.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0936580.0BT093658.1 Soybean clone JCVI-FLGm-24E10 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028186389.10.0NAC domain-containing protein 22-like
SwissprotQ10S651e-97NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A0B2PNZ10.0A0A0B2PNZ1_GLYSO; NAC domain-containing protein 22
STRINGGLYMA11G10230.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62143251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-112NAC domain containing protein 36
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  2. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]