PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN09437.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family C2H2
Protein Properties Length: 133aa    MW: 14999.4 Da    PI: 9.5129
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN09437.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.000622244123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C++ Fs+   L  H  +H
  KHN09437.1 22 FECKTCNRKFSSFQALGGHRASH 44
                89**********99999998887 PP
2zf-C2H213.30.000247092123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++Cg  Fs    L  H+r+H
  KHN09437.1 70 HECSICGLEFSLGQALGGHMRKH 92
                78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139125.4E-112246IPR007087Zinc finger, C2H2
SMARTSM003550.192244IPR015880Zinc finger, C2H2-like
SuperFamilySSF576678.64E-92292No hitNo description
PROSITE profilePS5015710.6992249IPR007087Zinc finger, C2H2
PROSITE patternPS0002802444IPR007087Zinc finger, C2H2
PfamPF139128.1E-107094IPR007087Zinc finger, C2H2
SMARTSM003550.157092IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.127092IPR007087Zinc finger, C2H2
PROSITE patternPS0002807292IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MLFSCPIESN KTQQKSFGSV EFECKTCNRK FSSFQALGGH RASHKRQKLE GEELKEQAKS  60
LSLWNKPKMH ECSICGLEFS LGQALGGHMR KHRASLNEGF PIIPSIDQVI AKIPVLKRSN  120
STRVMCLDLE LHL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN09437.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0917000.0BT091700.1 Soybean clone JCVI-FLGm-8J5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001235663.13e-94C2H2-type zinc finger protein
RefseqXP_028225726.13e-94zinc finger protein ZAT11-like
SwissprotQ9SLD41e-29ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A445LCV77e-93A0A445LCV7_GLYSO; Zinc finger protein ZAT11
TrEMBLC6T2P17e-93C6T2P1_SOYBN; Uncharacterized protein
STRINGGLYMA03G33070.11e-93(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.14e-32C2H2 family protein