PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN09555.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 195aa    MW: 22165.2 Da    PI: 6.6741
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN09555.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.66.2e-29110168159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +dDgy+WrKYG+K+vk+s++pr+YY+C+ +gC vkk+ver+++d ++v +tY g Hnh+
  KHN09555.1 110 MDDGYKWRKYGKKTVKSSPNPRNYYKCSGEGCDVKKRVERDRDDSNYVLTTYDGVHNHQ 168
                 59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-3097170IPR003657WRKY domain
SuperFamilySSF1182907.19E-27102170IPR003657WRKY domain
PROSITE profilePS5081130.469105170IPR003657WRKY domain
SMARTSM007745.5E-31110169IPR003657WRKY domain
PfamPF031061.2E-22111168IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MDYYFGNLNP NPYYHHSAVV NMASPSSEFM LSDYLVLEDA LVVDHHQESW SQSTETESSE  60
KATSSDASHG FGDATSTNTN IKCQNSGIKG KNAEVSQRIT FRTRSQLEVM DDGYKWRKYG  120
KKTVKSSPNP RNYYKCSGEG CDVKKRVERD RDDSNYVLTT YDGVHNHQTP STAYYSQMPL  180
LHSNHDWALH PFANS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-2398170274WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN09555.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195900.0EU019590.1 Glycine max WRKY61 (WRKY61) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001348333.11e-142WRKY transcription factor 51
RefseqXP_028236361.11e-142probable WRKY transcription factor 51
TrEMBLA0A445K9S41e-141A0A445K9S4_GLYSO; Putative WRKY transcription factor 51 isoform A
TrEMBLI1KBC51e-141I1KBC5_SOYBN; Uncharacterized protein
STRINGGLYMA06G15220.11e-141(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112034110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-34WRKY DNA-binding protein 51
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]