PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN11994.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 187aa    MW: 21315.1 Da    PI: 8.4809
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN11994.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.71.6e-301871255
     G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                prlrWtpeLH++Fvea+e+LGG++kAtPk+il+ m vkgL ++h+kSHLQ+YR 
  KHN11994.1 18 PRLRWTPELHQHFVEAIESLGGKHKATPKRILQQMRVKGLRIAHIKSHLQMYRN 71
                8****************************************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.5051474IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-271571IPR009057Homeodomain-like
TIGRFAMsTIGR015578.8E-241873IPR006447Myb domain, plants
SuperFamilySSF466893.23E-141872IPR009057Homeodomain-like
PfamPF002498.3E-91970IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MIKNSESSVR KYNKSELPRL RWTPELHQHF VEAIESLGGK HKATPKRILQ QMRVKGLRIA  60
HIKSHLQMYR NRKGHAIIAP VGQLLEDFKI CSISPTERIL KREETDYDLN QEPQSSALLL  120
SDDVSNEEEN FADLSFSFST PLMSIIQREN SKEIMRFSSS TAAANHSVDS SSTPSFANNY  180
INLDLTI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-191973458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-191973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-191973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-191973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-191973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-191973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-191973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-191973458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN11994.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006575636.11e-104putative Myb family transcription factor At1g14600
TrEMBLA0A445H0V21e-136A0A445H0V2_GLYSO; Putative Myb family transcription factor
TrEMBLK7M4P31e-136K7M4P3_SOYBN; Uncharacterized protein
STRINGGLYMA14G03527.11e-136(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91862839
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.14e-27G2-like family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]