PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN13783.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 195aa    MW: 22454.1 Da    PI: 6.3014
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN13783.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.58.1e-1584132553
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                 ++ rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L ++l++ +
  KHN13783.1  84 RKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVS 132
                 578***************************************9999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-1380144IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.38182145IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.6E-1284156No hitNo description
PfamPF001701.7E-1284131IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.31E-1384132No hitNo description
CDDcd147029.41E-1985132No hitNo description
PROSITE patternPS00036087102IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000165Biological ProcessMAPK cascade
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005622Cellular Componentintracellular
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004707Molecular FunctionMAP kinase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MQAREITGLN YLLPSDPCPY PGHYSMVQNT IPTFQLHKLS NQFYGLQNPP KVLADFSPPQ  60
SSCISSNSTS DEADEQQQSL INERKHRRMI SNRESARRSR MRKQKHLDEL WSQVVWLRNE  120
NHQLMDKLNH VSASQDKVVQ ENVQLREEAS ELRQMICDMQ LHSPYHPPPL SPIDDDVSPY  180
VKSDSSITDS LDLLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196103RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN13783.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0920860.0BT092086.1 Soybean clone JCVI-FLGm-10E7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001235016.21e-143bZIP transcription factor bZIP73A
RefseqXP_028213242.11e-143basic leucine zipper 43-like
SwissprotQ9FMC21e-43BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A445FYJ41e-142A0A445FYJ4_GLYSO; Basic leucine zipper 43
TrEMBLI1N4U01e-142I1N4U0_SOYBN; Uncharacterized protein
STRINGGLYMA18G51250.11e-143(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.12e-43basic leucine-zipper 42
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  2. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]