PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN14123.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 161aa    MW: 17637.7 Da    PI: 4.7344
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN14123.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.94.4e-071243238
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38
                 y+G+r ++  g+Wv eIr+p++   + r++lg+f t
  KHN14123.1 12 LYHGIR-CR-GGKWVTEIREPRK---TNRIWLGTFLT 43
                699999.55.7*********854...49*******76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.4E-101245IPR001471AP2/ERF domain
PROSITE profilePS510329.3081248IPR001471AP2/ERF domain
SMARTSM003803.9E-51259IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-61255IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MASSSSSKRH PLYHGIRCRG GKWVTEIREP RKTNRIWLGT FLTPGNEAVL NFPDSVGRYP  60
VPASNSPSDI RFAAIAAAEL MKPEANNNNN VNASTTNNAA VQSDSNDVLP SFETEFMDEE  120
AIFSMPSLLV DMAGGMLLSP PRMSPPSDNE SNYVGETLWN F
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN14123.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006600809.11e-100ethylene-responsive transcription factor ERF027
RefseqXP_028208644.11e-100ethylene-responsive transcription factor ERF027-like
SwissprotQ9FJ901e-37ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A0B2Q2C11e-114A0A0B2Q2C1_GLYSO; Ethylene-responsive transcription factor ERF025
STRINGGLYMA17G14100.11e-99(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.15e-31ERF family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  2. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]