PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN14124.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 220aa    MW: 24565.3 Da    PI: 5.9487
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN14124.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.3e-1965115154
         AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 
                 + y+GVr++  +++Wv+e+r+p   + k++r++lg++ t+e+Aa+a++ a+++l+
  KHN14124.1  65 PVYRGVRRRN-NNKWVCEVRVP---NdKSTRIWLGTYPTPEMAARAHDVAALSLR 115
                 68*****887.8*********9...6678***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.4E-1365116IPR001471AP2/ERF domain
SMARTSM003801.2E-1566122IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-2466118IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-1766116IPR016177DNA-binding domain
PROSITE profilePS5103219.4466132IPR001471AP2/ERF domain
PRINTSPR003671.6E-76778IPR001471AP2/ERF domain
CDDcd000189.79E-2167115No hitNo description
PRINTSPR003671.6E-790106IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MNILGQSLHQ SNNGSYSCSS PETANSSNLP TTPNAVHSDE EVNTLASAHP KKRAGRRIFK  60
ETRHPVYRGV RRRNNNKWVC EVRVPNDKST RIWLGTYPTP EMAARAHDVA ALSLRAIAAE  120
DSRGKQLRTN AIDAVADCEV SSSDIGVDEN CNNNKASQRF CDLDEITMPD APVFEDMHEW  180
LQTMAAGPLR SPTFVTYVNV RDVWNFVEDD AEVSLWSFTV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN14124.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028209980.11e-154dehydration-responsive element-binding protein 1E-like
TrEMBLA0A0B2Q2941e-163A0A0B2Q294_GLYSO; Dehydration-responsive element-binding protein 1C
STRINGGLYMA17G14111.11e-152(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.12e-35C-repeat/DRE binding factor 2
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]