PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN14515.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 196aa    MW: 21951.7 Da    PI: 11.0154
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN14515.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-103480354
                HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                ++h+e+E+rRR riN  +e+Lr +lP+        K +Ka++L ++++ +k+L
  KHN14515.1 34 KKHSEAEKRRRMRINGQYETLRNILPNiI------KKDKASVLAETIKQVKEL 80
                68*************************55......899999999999988887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.2723180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-73480IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.95E-83485No hitNo description
Gene3DG3DSA:4.10.280.103.8E-133592IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-133592IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-83786IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550212.29E-6122171No hitNo description
Gene3DG3DSA:3.30.70.2601.4E-5124181No hitNo description
CDDcd048733.22E-5124172No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MIRGGFHQTF ISRTYKTSFL KPRSKVEIKL LAAKKHSEAE KRRRMRINGQ YETLRNILPN  60
IIKKDKASVL AETIKQVKEL KKKVSKLEQD SSSNPSKDVV KFPNGTDKLN LERCNNDEGI  120
VKATLSCEDR LGLMSSISGA LEQVKAKVVK AEIVSVGGRA RSVLWVQGLG NDGTGTLKSK  180
LRVAMQKPPK MQRFTQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN14515.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006573014.11e-142transcription factor bHLH131-like
RefseqXP_028228648.11e-142transcription factor bHLH131-like
SwissprotP0CB252e-46BH131_ARATH; Transcription factor bHLH131
TrEMBLA0A0B2PZH11e-140A0A0B2PZH1_GLYSO; Transcription factor bHLH131
TrEMBLA0A445LXY61e-140A0A445LXY6_GLYSO; Transcription factor bHLH131
STRINGGLYMA01G02930.21e-141(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126113032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.11e-40bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]