PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN14728.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family GeBP
Protein Properties Length: 360aa    MW: 41304.2 Da    PI: 4.607
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN14728.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57380.42.8e-25109206297
      DUF573   2 lfqrlwseeDeivlLqGlidf..kaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 + qrlw++eDe+ lL+G +d+  ++++++   +  +  +y+ v+ ++++ ++k+qlveK+rrLK+K k   +k +++ke+ f+++++q ife+s+kiWg
  KHN14728.1 109 QYQRLWTKEDEMELLKGYLDYvkRHRKETTTLQsVVASLYDHVRPKLNVSFNKNQLVEKLRRLKRKHKLALDK-DKDKEVPFRNPQEQAIFEISHKIWG 206
                 579******************63333444444448899***********************************.99**********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.9E-25111206IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MLSPLVSWIL SPSSSSSSSE EEEEEILDII TDNDINHEND QKLNVEDDEC DVDNTIPVAL  60
AVPNASPAVT VAFPANDERN TIPVTATATT VVTCSKGQCN AKYSGMVRQY QRLWTKEDEM  120
ELLKGYLDYV KRHRKETTTL QSVVASLYDH VRPKLNVSFN KNQLVEKLRR LKRKHKLALD  180
KDKDKEVPFR NPQEQAIFEI SHKIWGIDTD NIIDQDALDG YESGHTPESH DHVGNIKVKI  240
EQLDNNDEID NRVPKRLRLD DADDADDVNK TNDQNNGDSI QGFIEETMRS CFPPLLKEVL  300
HDAHEEPLPE LEPIPMPLCP GEVDHEQWRK RRILELEVYV KRLELLQDQI KSRLEQLRSN
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN14728.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028220498.10.0probable transcription factor At5g28040
TrEMBLA0A0B2Q4210.0A0A0B2Q421_GLYSO; Putative transcription factor
STRINGGLYMA20G37220.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1630579
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.17e-30DNA-binding storekeeper protein-related transcriptional regulator
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]