PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN15478.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 186aa    MW: 20314.9 Da    PI: 8.9796
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN15478.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.31.9e-082401354
         AP2 13 grWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                g++ ++Ir+p   gk+  ++lg+f++a e aka++aa+ k+ 
  KHN15478.1  2 GKYGVYIRHP---GKKILVWLGTFDSAIEVAKAYDAAAIKFC 40
                8999*****8...557**********************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.116150IPR001471AP2/ERF domain
SMARTSM003802.7E-11256IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-8250IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.3E-14250IPR001471AP2/ERF domain
CDDcd000182.82E-16249No hitNo description
Gene3DG3DSA:3.30.730.101.8E-578103IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MGKYGVYIRH PGKKILVWLG TFDSAIEVAK AYDAAAIKFC GFDKAKTNFS IPQNHNNNVV  60
IQTPTTMDSL TTNFTSHNQE AAKAYDAAAI KFCDPDKART NFPIPKIHKN NMVIQTPTTI  120
NSSTTTTNPS SSMSLPIHVN CSTSHNQGHS GCSSSSTFIV VEAGKKLDVD LNYPPPPRNP  180
LNREQC
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN15478.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028242307.11e-137ethylene-responsive transcription factor 11-like
TrEMBLA0A0B2Q5Y71e-136A0A0B2Q5Y7_GLYSO; Ethylene-responsive transcription factor 9
STRINGGLYMA07G31995.11e-104(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3558722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.17e-17erf domain protein 9
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]