PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN15700.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 193aa    MW: 21476.9 Da    PI: 7.0869
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN15700.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.54.9e-082369654
                HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                 e+E++RR ++    + Lr+ lP  +    ++K s ++   +Av+YI+ L
  KHN15700.1 23 REVEKQRRTNMSILCASLRSSLPFeL---IKGKRSASDHIGEAVNYIQIL 69
                699*********************78...******************966 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-111487IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.0581769IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.21E-51773No hitNo description
Gene3DG3DSA:4.10.280.104.5E-82285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-52369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MAQENQHIIL VTSDNDERKI IRREVEKQRR TNMSILCASL RSSLPFELIK GKRSASDHIG  60
EAVNYIQILK QKINALQVKR DRLKLMVNSS LLETSIDQPE HSGAVVKCVN INLIPGGVEI  120
AICSSGLEEG SNSPLSEFME ILLQEGCDVV SCVSTLANGR IFHAIKCEVE ADLTRLDLAK  180
LQHKLDHAIL LPR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN15700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003556078.31e-138transcription factor bHLH36
RefseqXP_028221504.11e-138transcription factor bHLH36-like
TrEMBLA0A445F5C31e-137A0A445F5C3_GLYSO; Transcription factor bHLH120 isoform A
TrEMBLI1NGM81e-137I1NGM8_SOYBN; Uncharacterized protein
STRINGGLYMA20G29130.11e-137(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.18e-28bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]