PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN16262.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Dof
Protein Properties Length: 288aa    MW: 31399.8 Da    PI: 10.7176
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN16262.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1183.8e-372482260
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                +++++kcprC s+ntkfCy+nnyslsqPr+fCk+C+ryWt+GG++rn+PvGgg+rk k+
  KHN16262.1 24 PQQHQKCPRCGSMNTKFCYFNNYSLSQPRHFCKTCKRYWTHGGTFRNIPVGGGSRKVKR 82
                68899***************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-181872IPR003851Zinc finger, Dof-type
PfamPF027014.6E-322682IPR003851Zinc finger, Dof-type
PROSITE profilePS5088427.9872882IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103066IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MEQEGEKGRE ERRQVQRAAT QQPPQQHQKC PRCGSMNTKF CYFNNYSLSQ PRHFCKTCKR  60
YWTHGGTFRN IPVGGGSRKV KRGKTNSSSF SSSSSSSSNL LTQPQQNLLM RPSPPLITTM  120
VQSTSPYYHL AGGSGYLSSL ATLHSLNNNT SQPFNQYLKV GGDFAGSSNS PLVSGFNAAY  180
SLPPRFPQQQ SMYPAQQQQQ QQQRLIPSNM ASSGAVSHSA LRTQSLINNV STSTNHRASI  240
SDASLWSAAT VNTTSIGGNS DQNNVVKGGS SSLVPSHWLH RPGFGPPQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN16262.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ8572591e-155DQ857259.1 Glycine max Dof9 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014633048.10.0dof zinc finger protein DOF2.2
RefseqXP_028241071.10.0dof zinc finger protein DOF2.2-like
TrEMBLA0A0B2Q9140.0A0A0B2Q914_GLYSO; Dof zinc finger protein DOF5.3
TrEMBLK7L2R30.0K7L2R3_SOYBN; Uncharacterized protein
STRINGGLYMA07G31860.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41453258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.11e-24DOF zinc finger protein 1
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]