PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN18024.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family GeBP
Protein Properties Length: 199aa    MW: 22955.4 Da    PI: 10.3103
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN18024.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573721.1e-221791997
      DUF573 19 lidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
                + +f +ktg++p++  daf +fvk+s+ +++s++q+ eKirrLKkKf++k ++ak+ ++p+fsk hd+ +felskk+Wg
  KHN18024.1  1 MAEFISKTGQDPYKYADAFQNFVKNSLRVEASSNQIKEKIRRLKKKFETKAQRAKKWEDPEFSKFHDRTVFELSKKVWG 79
                67899*************************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.4E-20179IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MAEFISKTGQ DPYKYADAFQ NFVKNSLRVE ASSNQIKEKI RRLKKKFETK AQRAKKWEDP  60
EFSKFHDRTV FELSKKVWGE GANGLVEKPK PNNGKRKTAK TPKKDATSRN VVAKSETTTL  120
LESMELEECG NVNLLYREVS GFKELNEDEM KRGLALIGES KRKELEGKWR KLRLAEMELV  180
ANRSLLIGEQ IKLIFEALQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN18024.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028231985.11e-143GLABROUS1 enhancer-binding protein-like
TrEMBLA0A445KL491e-142A0A445KL49_GLYSO; Putative transcription factor
STRINGGLYMA05G12406.11e-141(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.13e-18DNA-binding storekeeper protein-related transcriptional regulator
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]