PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN18953.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 68aa    MW: 7712.86 Da    PI: 11.4134
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN18953.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.83.1e-091436224
         AP2  2 gykGVrwdkkrgrWvAeIrd.pse 24
                +y+GVr ++ +gr++AeIrd +++
  KHN18953.1 14 HYRGVRKRP-WGRYAAEIRDpWKK 36
                69*******.**********8854 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103210.8761468IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-61442IPR016177DNA-binding domain
PfamPF008473.1E-41436IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.8E-111442IPR001471AP2/ERF domain
SMARTSM003800.00191463IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    Send to blast
MAPSSSASAS REGHYRGVRK RPWGRYAAEI RDPWKKTRVM EGSPTASFLG FVRRGIPIDL  60
NEPPPMWL
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN18953.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003593626.13e-17ethylene-responsive transcription factor 12
SwissprotQ94ID68e-16ERF81_ARATH; Ethylene-responsive transcription factor 12
TrEMBLA0A0B2QG708e-42A0A0B2QG70_GLYSO; Ethylene-responsive transcription factor 12
STRINGAES638771e-16(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.13e-18ERF domain protein 12
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]