PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN19314.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 193aa    MW: 22072.6 Da    PI: 10.0095
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN19314.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.16.3e-081969654
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksL 54
                + +Er+RR +++s  ++L +l+P++ k+ ++K  l   + L +A +YI+++
  KHN19314.1 19 KTIERNRRTHMKSLCHQLSSLIPPNLKPAKPKlmLGLQDQLDLAARYIRQM 69
                689*********************6677777755677799********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.09E-51174No hitNo description
PROSITE profilePS508889.8071369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.4E-91787IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.07E-91786IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-51969IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MMKKRVASTS NESSKLDRKT IERNRRTHMK SLCHQLSSLI PPNLKPAKPK LMLGLQDQLD  60
LAARYIRQMT ERVEKLKRQK EQAMSNQSND GRKMFNNNVE SKLPILELRD LGSGIEVILV  120
TGLNKTFMLY EVISVLEEEG AEVVTASFST VGDKIFYVVH AQAKISRVGV ETTRVYNRLQ  180
EFIVPPEIWP EDV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN19314.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028237129.11e-141transcription factor bHLH168-like
TrEMBLA0A445KBH91e-140A0A445KBH9_GLYSO; Transcription factor bHLH162 isoform A
STRINGGLYMA06G19490.11e-140(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-26bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]