PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN20149.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 251aa    MW: 28837.6 Da    PI: 4.3262
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN20149.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.42.6e-162674355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +kGVr +k +g+Wv+eIr p++   r r++lg+++t  +Aa+a +aa  +l+g
  KHN20149.1 26 FKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTQVKAARAFDAALYCLRG 74
                8****999.**********933...5**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.04E-192583IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.3E-282583IPR001471AP2/ERF domain
PROSITE profilePS5103220.9692582IPR001471AP2/ERF domain
SMARTSM003802.2E-292588IPR001471AP2/ERF domain
CDDcd000181.53E-272684No hitNo description
PfamPF008473.6E-92674IPR001471AP2/ERF domain
PRINTSPR003675.8E-82637IPR001471AP2/ERF domain
PRINTSPR003675.8E-84864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MASVDSSSCN NDSFSSNNNI DSCKMFKGVR KRKWGKWVSE IRLPNSRERI WLGSYDTQVK  60
AARAFDAALY CLRGQSATFN FPDTPRHLET NMVLSRDKQP QPLSHQEIQE VAVKFANNDD  120
HPLEEEECAF QKQEQERSLE ESQSDESKSG NTIMEMSNFP SIYDGETHNN NVQVDQLKGD  180
WDTMDWTFLN MLDDLNGSDF GLYVGLDKMH PSEFLCPMTQ APLLYHGDDE IEGDDDHDAF  240
SNHSLLWSWN F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1526821572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12632KGVRKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN20149.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006601199.10.0ethylene-responsive transcription factor ERF017
RefseqXP_028208804.10.0ethylene-responsive transcription factor ERF017-like
TrEMBLA0A445GA870.0A0A445GA87_GLYSO; Ethylene-responsive transcription factor ERF017
TrEMBLK7MNA50.0K7MNA5_SOYBN; Uncharacterized protein
STRINGGLYMA17G33535.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-38ERF family protein