PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN20340.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 305aa    MW: 34369.6 Da    PI: 8.7825
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN20340.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1031.8e-32255255
     G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                prlrWtp+LH rFv+av++LGG+e+AtPk +l+lm++kgL+++hvkSHLQ+YR+
  KHN20340.1  2 PRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRS 55
                8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.0E-29156IPR009057Homeodomain-like
PROSITE profilePS5129413.869158IPR017930Myb domain
SuperFamilySSF466891.72E-14256IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-23257IPR006447Myb domain, plants
PfamPF002491.1E-9354IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MPRLRWTPDL HLRFVHAVQR LGGQERATPK LVLQLMNIKG LSIAHVKSHL QMYRSKKVDT  60
NQVLADPRFL VETGDRNVYN LSQLPMLQGY NPSQSSSYRQ YGYGDASLAI YENMVHRPFM  120
NRSSLDESGA EFCGSRLTER IHGTNSNINW TRNMFQADSS SSFNEPSTSK VQEPKHKFFS  180
FGGNESSCTQ IKMSQVDLHQ STQLQPGAQE LMPNNKFATN EVELKTLKRK ASDIDLDLNL  240
SLKLNSRVNA ENQGSMVDHE VVDSNLSLSL CSQSSSFSSN RLKNSQDHSK EQGEIIRASA  300
LDLTI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-18357458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-18357458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-18357458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-18357458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-18357458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-18357458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-18357458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-18357458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN20340.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150377e-44AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028213356.10.0two-component response regulator ARR18-like isoform X1
TrEMBLA0A0B2QGJ60.0A0A0B2QGJ6_GLYSO; Putative Myb family transcription factor
STRINGGLYMA18G43550.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-43G2-like family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]