PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN21242.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family HD-ZIP
Protein Properties Length: 716aa    MW: 78032.2 Da    PI: 5.9737
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN21242.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.41.6e-204499156
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  KHN21242.1 44 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 99
                688999***********************************************999 PP
2START226.96.1e-712354551206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela +a++el+ +a+ +ep+W +      +++n+de++++f+++ +     ++ +a+r+++vv+m++++lve+l+d++ qW++ +     +a+tlev+s
  KHN21242.1 235 ELAVAAMEELIGMAQMGEPLWLTTLdgtsTMLNEDEYIRSFPRGIGpkpsgFKCQASRETAVVIMNHVNLVEILMDVN-QWSTVFSgivsRAMTLEVLS 332
                 57899**************************************999********************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                 +g      galq+m+aelq+++plvp R+++fvRy++q+ +g+w++vdvS+d+ ++ p    ++R++++pSg+li++++ng+skvtwvehv++++r +h
  KHN21242.1 333 TGvagnynGALQVMTAELQLPTPLVPtRESYFVRYCKQHADGTWAVVDVSLDNLRPGP----SARCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVH 427
                 **********************************************************....5************************************ PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 +l+++lv+sg+a+gak+wvatl+rqce+
  KHN21242.1 428 NLYKQLVSSGHAFGAKRWVATLDRQCER 455
                 **************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-232399IPR009057Homeodomain-like
SuperFamilySSF466891.38E-1932101IPR009057Homeodomain-like
PROSITE profilePS5007116.92541101IPR001356Homeobox domain
SMARTSM003891.2E-1942105IPR001356Homeobox domain
PfamPF000464.0E-184499IPR001356Homeobox domain
CDDcd000862.40E-1944102No hitNo description
PROSITE patternPS0002707699IPR017970Homeobox, conserved site
SuperFamilySSF559612.2E-35226457No hitNo description
PROSITE profilePS5084843.74226458IPR002913START domain
CDDcd088751.28E-129230454No hitNo description
SMARTSM002343.1E-64235455IPR002913START domain
PfamPF018525.9E-60236455IPR002913START domain
Gene3DG3DSA:3.30.530.202.6E-5328437IPR023393START-like domain
SuperFamilySSF559611.87E-25475708No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010090Biological Processtrichome morphogenesis
GO:0048497Biological Processmaintenance of floral organ identity
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 716 aa     Download sequence    Send to blast
MGQNTSESEV PRILEDEFDS ATKSGSENHE GASGEDQDPR PNKKKRYHRH TQHQIQEMEA  60
FFKECPHPDD KQRKELSREL GLEPLQVKFW FQNKRTQMKT QHERHENTNL RTENEKLRAD  120
NMRYREALSN ASCPNCGGPT AIGEMSFDEH HLRLENARLR EEIDRISAIA AKYVGKPVVN  180
YSNISPSLPP RPLELGVGGA GFGGQPGIGV DMYGAGDLLR SISGPTEADK PIIIELAVAA  240
MEELIGMAQM GEPLWLTTLD GTSTMLNEDE YIRSFPRGIG PKPSGFKCQA SRETAVVIMN  300
HVNLVEILMD VNQWSTVFSG IVSRAMTLEV LSTGVAGNYN GALQVMTAEL QLPTPLVPTR  360
ESYFVRYCKQ HADGTWAVVD VSLDNLRPGP SARCRRRPSG CLIQEMPNGY SKVTWVEHVE  420
VDDRGVHNLY KQLVSSGHAF GAKRWVATLD RQCERLASAM ATNIPTVDVG VITNQDGRKS  480
MMKLAERMVI SFCAGVSAST AHTWTTLSGT GADDVRVMTR KSVDDPGRPP GIVLSAATSF  540
WLPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL RVNSANSSQS  600
NMLILQESCT NSTGSFVIYA PVDIVAMNVV LNGGDPDYVA LLPSGFAILP DGTTSHNGSG  660
GIGETGPSGS LLTVAFQILV DSVPTAKLSL GSVATVNNLI ACTVERIKAS LSGEPA
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN21242.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003539872.20.0homeobox-leucine zipper protein HDG2 isoform X1
RefseqXP_014620139.10.0homeobox-leucine zipper protein HDG2 isoform X1
RefseqXP_028192701.10.0homeobox-leucine zipper protein HDG2-like isoform X1
RefseqXP_028192702.10.0homeobox-leucine zipper protein HDG2-like isoform X1
SwissprotQ94C370.0HDG2_ARATH; Homeobox-leucine zipper protein HDG2
TrEMBLA0A445HN790.0A0A445HN79_GLYSO; Homeobox-leucine zipper protein HDG2 isoform A
TrEMBLK7LTZ80.0K7LTZ8_SOYBN; Uncharacterized protein
STRINGGLYMA12G10710.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15083499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0homeodomain GLABROUS 2