PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KHN22538.1

Organism

Glycine soja

Taxonomic ID

3848

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 326aa MW: 35714.3 Da PI: 10.0354

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN22538.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.6	1.7e-15	254	301	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r++r++kNRe+A rsR+R++a+++eLe kv Le+eN++L+ +l+e++ KHN22538.1 254 RRQKRMIKNRESAARSRARRQAYTQELEIKVSRLEEENERLR-RLNEME 301 79*************************************999.666554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.3E-15	247	297	No hit	No description
SMART	SM00338	8.9E-15	250	320	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.346	252	296	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	9.1E-12	254	297	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.38E-10	254	300	No hit	No description
PROSITE pattern	PS00036	0	257	272	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence Send to blast
MGSQGGAVQE PKTTTTTTTP FVRQGPLYNL TLDEVHNQLG NLGKPLGSMN LDELLKSVWS 60 AEASGGEASG LDFGVGGGDA NMQHGEAAAF GSSLNPHVSL TLSRDLSRKT VHEVWRDMQL 120 KKVTNRDKKI QERQATLGEM TLEDFLVKAG VIAEALPTTK DRAMSGVDSN GASSQHGHWL 180 QYQQLPSSVQ QPNVMGGYVA GHAIQQPFQV GVNLVLDAAY SETPASLKGA LSDTQTLGRK 240 RGVSGIVVEK TVERRQKRMI KNRESAARSR ARRQAYTQEL EIKVSRLEEE NERLRRLNEM 300 ERALPSVPPP EPKPKHQLRR TSSAIF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN22538.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT031143	0.0	KT031143.1 Glycine max clone HN_CCL_31 BZIP transcription factor (Glyma19g20090.1) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003524605.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_028231957.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	2e-90	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A0B2QRN1	0.0	A0A0B2QRN1_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	I1K1W3	0.0	I1K1W3_SOYBN; Uncharacterized protein
STRING	GLYMA05G13890.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1320	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-64	ABA-responsive element binding protein 3

Publications ? help Back to Top
Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]