PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN22923.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 274aa    MW: 30981.3 Da    PI: 9.9061
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN22923.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.53.5e-14190247259
                 XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                 + l++ rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L ke  e++ + +k+
  KHN22923.1 190 ATLQKLRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENARLLKEEAEMRRQRKKH 247
                 57899***************************************99988888777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.7E-14189253IPR004827Basic-leucine zipper domain
PfamPF001701.4E-12190245IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.174191243IPR004827Basic-leucine zipper domain
CDDcd147071.29E-17193240No hitNo description
SuperFamilySSF579598.13E-11193244No hitNo description
Gene3DG3DSA:1.20.5.1702.2E-13194245No hitNo description
PROSITE patternPS000360196211IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MMPNSDKSYK PSYLIDDEEE NCVESAITRV VMFKNEREGH LMLKSNKRRL ETRHGVVEGC  60
LDESGSSTGP FFFIIFVFFY ISPFFSSLRS APHGRPPQVH HPQFRRQGIA AASTDNAGGV  120
TLEDFLTKAI PVTEEDVRGA PPPPPSFLPF PADGSSSSVE PFANNGVGSA PSNSVQKGKR  180
RAVEEPVDKA TLQKLRRMIK NRESAARSRE RKQAYTSELE YLVHQLEQEN ARLLKEEAEM  240
RRQRKKHLFE CIIPIEVMPK PKKKLRRVNS AQSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14248LKSNKRR
2259265KPKKKLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN22923.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006579488.11e-116bZIP transcription factor bZIP9 isoform X1
RefseqXP_028232363.11e-116bZIP transcription factor 12-like isoform X1
TrEMBLA0A0B2QSW70.0A0A0B2QSW7_GLYSO; G-box-binding factor 4
STRINGGLYMA05G25200.31e-115(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.19e-25G-box binding factor 4
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]