PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN23358.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Nin-like
Protein Properties Length: 217aa    MW: 24862.8 Da    PI: 7.8062
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN23358.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK79.92.6e-25110157552
      RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 +++e++skyF  pi++AAk+++v++T+LK++CR+++I+RWP+Rkiksl
  KHN23358.1 110 LEFEEISKYFGVPINEAAKQMNVGVTMLKKRCRELNIMRWPRRKIKSL 157
                 89********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151916.98493178IPR003035RWP-RK domain
PfamPF020423.0E-22110157IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MEISPLKGYF SHLDWTPQSP YPSNELPDLE SWNLDFILPP LDEDLEELDQ KQLKSVVPQG  60
FHCNQEKGFG DALLATENVS ATCVKKEKVQ IIDQSPLASS SSTKKRPCAL EFEEISKYFG  120
VPINEAAKQM NVGVTMLKKR CRELNIMRWP RRKIKSLQMV IDSVKEMGLE DEVARLEEHK  180
KLLEKLPGLE LSEEAKKLRH ACFKANYKKK RCMALQA
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN23358.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006581652.11e-159protein RKD4
RefseqXP_028236125.11e-159protein RKD4-like
TrEMBLA0A445K8Z31e-157A0A445K8Z3_GLYSO; Protein RKD4
TrEMBLK7KUT31e-157K7KUT3_SOYBN; Uncharacterized protein
STRINGGLYMA06G13530.21e-158(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68983247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.14e-28RWP-RK domain-containing protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]