PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN24157.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 505aa    MW: 54496.9 Da    PI: 8.1635
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN24157.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.65.2e-32317370255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  KHN24157.1 317 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 370
                 9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.23E-15314370IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-28315370IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-23317370IPR006447Myb domain, plants
PfamPF002499.7E-7318369IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009887Biological Processorgan morphogenesis
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0009956Biological Processradial pattern formation
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010158Biological Processabaxial cell fate specification
GO:0010229Biological Processinflorescence development
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MPLEGIFIEP TSTSIPDLSL HISPPSTSSS SSLICSNNNN NNNTSGGGGG INYEAHNSRS  60
TNFPSQAHTE LSLGRNFSVG GGGRGGGALE EPPPHNNNIN NNPYYQTQKA HLQHLHQHHS  120
NASRATTSTT TSSSNHMSHI NYGVSLLDVS SEGMRPIKGI PVYHNRSFPF LPLEHSRSDK  180
DHHAKMCLYH HMPTYPSLSS SCSPLCPSSS SSSPAAPYFV ATAATAGGLD PMSYLSCSGG  240
TTNPAAYRAA TATRFNGFSG EAFKSHHPLH HHHHSSSSSS SPQYGVGPGP SHLEVSSGLM  300
RSRFLPKLPA KRSMRAPRMR WTSTLHARFV HAVELLGGHE RATPKSVLEL MDVKDLTLAH  360
VKSHLQMYRT VKTTDKPAAS SGLSDGSGED DMSPMGSSGG MRQFSDQRSL SDRPVQQDMD  420
YSSANNTLWS NSSSSREPWQ QNNSNDIDGF RPPIFQSQQI SGGHQIQECD STQLKNSLSG  480
SNLECKNPSL EFTLGRPDWN GKGQA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-16318372357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-16318372357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-16318372357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-16318372357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN24157.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028195883.10.0transcription repressor KAN1-like isoform X2
TrEMBLA0A0B2QWZ30.0A0A0B2QWZ3_GLYSO; Transcription repressor KAN1
STRINGGLYMA11G33356.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17563391
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.13e-63G2-like family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]