PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN25436.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 550aa    MW: 60270.5 Da    PI: 6.8487
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN25436.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.16.1e-11394452563
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +a l++++
  KHN25436.1 394 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQN 452
                 9*************************************************999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-17390454IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.909392455IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.45E-11394445No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-11394451No hitNo description
PfamPF001702.1E-9394452IPR004827Basic-leucine zipper domain
CDDcd147032.68E-24395446No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MGENEEAMQR LHFLKQPLNM EQLSIPQFNP SQMRARQHHH QNQFDGGNSN KRAGIPPSHP  60
HPIPPISPYS QIPVSRQHNN ISPTPTHTRS LSQPSFFSLD SLPPLSPSPF RDSSSTSVSE  120
AADVSMEDRD VSSHSLLPPS PFSRTLNNSN LPLPPRKAHR RSNSDIPFGF STVLQSSPPL  180
IPLRNPVSAK PAQLVKRETP WDRGVENNNN NNVEGSGEKK SPEGEVVDDL FSAYMNLDSF  240
DALNSSGTDD KNGGENRDDL DSRASGTKTN GGDSSDNEAE SSVNESGDGG VRQGGNEKRE  300
GMKRSAGGEI APTTRHYRSV SMDSFIGKLN FDEESPKLPP SPGQRSALMS PAGGIDGNSA  360
AFSLEFGNGE FSGPELKKIM ANEKLAEIAL IDPKRAKRIL ANRQSAARSK ERKMRYISEL  420
EHKVQTLQTE ATTLSAQLTL LQRDSAGLTN QNSELKFRLQ SMEQQAKLRD ALNEALTAEV  480
QRLKLATAEL SGDSHGSGCL IPQHSVNPLM FQQQQQPPTA SQQNIHLQQQ QQQQQQHQNG  540
NANSNSDLKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN25436.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150390.0AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028193988.10.0probable transcription factor PosF21
TrEMBLA0A445HK170.0A0A445HK17_GLYSO; Putative transcription factor PosF21 isoform A
STRINGGLYMA12G04050.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-114bZIP family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]