PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN26140.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family MYB_related
Protein Properties Length: 249aa    MW: 27997.3 Da    PI: 4.7854
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN26140.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.7e-09201229129
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                      r +W++eEd++l  av+++G g+W+t a+
       KHN26140.1 201 REPWSEEEDLQLRAAVRRWGEGNWATMAK 229
                      789***********************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.74E-8195242IPR009057Homeodomain-like
PROSITE profilePS512949.774196249IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.5E-10196242IPR009057Homeodomain-like
PfamPF002492.1E-7201229IPR001005SANT/Myb domain
CDDcd116601.56E-8203243No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MKKTSNVFFS EDEAAVLLQR YNAQTILTLL QELANYPDSK FDWDDLVAKT STGISNAREY  60
QMLWRHLAYG HSFDENSDLD NQPLDDDSDL ECEREALPRP NKEIAAEASA CVQVMMTSFK  120
LNESTPTSSV IQAPLTINVP VFRSSRIANM ESSQSSSSGM QETNIVFPVT VKRQALPNVP  180
STRAVETRGS GSGYTSMKKK REPWSEEEDL QLRAAVRRWG EGNWATMAKS DDFPIQRSTT  240
QLSKVFLQP
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN26140.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351870.0AC235187.1 Glycine max strain Williams 82 clone GM_WBb0010C08, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003518263.20.0telomeric repeat-binding factor 1
RefseqXP_028213072.10.0telomeric repeat-binding factor 1-like
TrEMBLA0A0R0KZQ60.0A0A0R0KZQ6_SOYBN; Uncharacterized protein
TrEMBLA0A445LRW30.0A0A445LRW3_GLYSO; Uncharacterized protein
STRINGGLYMA02G37841.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.18e-46MYB_related family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]