PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN26249.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Nin-like
Protein Properties Length: 268aa    MW: 31511.6 Da    PI: 5.9379
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN26249.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK80.91.3e-25135184352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 k +s  ++s+yF++pi +AA+eL+v+lT LK++CR++GI+RWPhRk+ sl
  KHN26249.1 135 KMLSRTTVSQYFYMPISKAARELNVGLTHLKKRCRELGIQRWPHRKLMSL 184
                 789999*****************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.416117205IPR003035RWP-RK domain
PfamPF020426.4E-21137184IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051302Biological Processregulation of cell division
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MENQQLTFWK SNYDIDDYYP FAPTCQFSSY DYCGWGSAAD GYHWPHEFPL QDSYLDAIPF  60
MKFYYPHDIL YETTLPIEPT SLSIQDYDFS DWNEIDGSDH KPVFLSCNDG ESVSEMKEDL  120
NAKKCREEKI SSSAKMLSRT TVSQYFYMPI SKAARELNVG LTHLKKRCRE LGIQRWPHRK  180
LMSLQTLIKN IQEQGEAEGH ENDEKLRAAI EMLKREKRKV EEMPDLELED NTRRLRQACF  240
KANYKKRKLV GMRFIEPESS LSGLSNKY
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN26249.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028236548.10.0protein RKD1-like
TrEMBLA0A445KBZ20.0A0A445KBZ2_GLYSO; Protein RKD1 (Fragment)
STRINGGLYMA06G20881.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61843052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.14e-56RWP-RK domain-containing protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]