PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN26704.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 132aa    MW: 15583.9 Da    PI: 10.0202
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN26704.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.83.6e-165194447
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
                l+++rr++kNRe+A rsR+RK+a++ eLe  v  Le+eN  L k
  KHN26704.1 51 LQKQRRMIKNRESAARSRERKQAYTVELESLVTHLEEENAILLK 94
                89*************************************98865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-1148110IPR004827Basic-leucine zipper domain
PfamPF001701.3E-135099IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.27750102IPR004827Basic-leucine zipper domain
CDDcd147071.28E-155295No hitNo description
SuperFamilySSF579593.25E-1152102No hitNo description
Gene3DG3DSA:1.20.5.1704.2E-1453107No hitNo description
PROSITE patternPS0003605570IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MEMESQDNMN MSMSLQDLLT ENDAVPPSHS HGRGKRKTLV EEPLVVDKVT LQKQRRMIKN  60
RESAARSRER KQAYTVELES LVTHLEEENA ILLKQEADRK RQRFNQLMEC LIPVEEKRKP  120
KPMLRRVNSS QW
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN26704.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0922847e-45BT092284.1 Soybean clone JCVI-FLGm-10F13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001345673.16e-93transcription factor bZIP81
RefseqXP_028244266.16e-93G-box-binding factor 4-like
SwissprotP427771e-25GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A0R0IVB61e-91A0A0R0IVB6_SOYBN; Uncharacterized protein
TrEMBLA0A445JGF91e-91A0A445JGF9_GLYSO; G-box-binding factor 4 isoform A
STRINGGLYMA08G19590.23e-82(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.18e-32bZIP family protein