PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN28451.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 237aa    MW: 27706.1 Da    PI: 6.6986
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN28451.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.89.8e-0851101559
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                  + rr  +NR AA+rsR++Kk  +++Le   k++e+e      + ++l++++++ 
  KHN28451.1  51 PKLRRIFSNRFAAQRSREKKKNHLANLEIQKKTFENEIA----QKQRLQDLYENK 101
                 5779999***************************99984....556666666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.002547111IPR004827Basic-leucine zipper domain
PfamPF077166.1E-55290IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.34E-752100No hitNo description
Gene3DG3DSA:1.20.5.1703.4E-65398No hitNo description
PROSITE patternPS0003605469IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MENPKENNKV ENHHTVNAIL SPTFVFSATK LADQFGYAEG NPTPEQQILD PKLRRIFSNR  60
FAAQRSREKK KNHLANLEIQ KKTFENEIAQ KQRLQDLYEN KRQTQIVEEE TMYQEIDILK  120
NYSMFKDAEI EKDKGEVIRE RELQVIEQQE ELQAHLVNLN IGPQEPVSNY PTSNYYANSY  180
PDLVWRGNER TINLEIKGKS VTSNMKISTT QTNTSILEEV GNWLSYKNYI ITAGRHR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN28451.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028186417.11e-126basic leucine zipper 6-like
TrEMBLA0A0B2R2X41e-174A0A0B2R2X4_GLYSO; Uncharacterized protein
STRINGGLYMA11G28691.11e-170(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1614935
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.22e-07bZIP family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]