PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN29360.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family BES1
Protein Properties Length: 1406aa    MW: 157523 Da    PI: 6.9013
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN29360.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8221456.4e-452774171134
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaagssas..aspess 93 
                 gg++r+++ +E+E++k+RERrRRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DG t++   +g+kp   ++ ++ ss+s  as++++
  KHN29360.1 277 GGTRRSRPLEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGSTFPsrsQGQKPAgGNSTIVTSSSSlaASQQTP 375
                 5899*****************************************************************988899999975555555555555788887 PP

      DUF822  94 lq.sslkssalaspvesysaspksssfpspssldsislasaa 134
                 +  ++ ++s  +sp+e  ++++k + +p ps +d  s++ ++
  KHN29360.1 376 SAsLRGVASGYRSPLEYNACQTKGVFMPTPSPYDLSSSSRSQ 417
                 77688999**************************98776543 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF059382.3E-4378IPR010264Plant self-incompatibility S1
PfamPF056872.2E-39278417IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514452.11E-150460866IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.805.0E-139461747IPR013781Glycoside hydrolase, catalytic domain
PfamPF013731.4E-77467751IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.1E-39498512IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.1E-39519537IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.1E-39541562IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.1E-39634656IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.1E-39707726IPR001554Glycoside hydrolase, family 14
Gene3DG3DSA:3.20.20.801.8E-22748864IPR013781Glycoside hydrolase, catalytic domain
SuperFamilySSF546371.86E-10912978IPR029069HotDog domain
Gene3DG3DSA:3.10.129.106.2E-15913977IPR029069HotDog domain
Gene3DG3DSA:2.60.120.107.3E-159991110IPR014710RmlC-like jelly roll fold
SuperFamilySSF512065.76E-1710011110IPR018490Cyclic nucleotide-binding-like
PROSITE profilePS5004213.64810081068IPR000595Cyclic nucleotide-binding domain
CDDcd000381.72E-1310081110No hitNo description
PfamPF000271.4E-810271109IPR000595Cyclic nucleotide-binding domain
PROSITE patternPS00888010351051IPR018488Cyclic nucleotide-binding, conserved site
Gene3DG3DSA:3.10.129.106.3E-4011281235IPR029069HotDog domain
SuperFamilySSF546373.05E-3111321236IPR029069HotDog domain
CDDcd034453.71E-3811441235No hitNo description
PfamPF136224.1E-5211581392No hitNo description
Gene3DG3DSA:3.10.129.102.6E-4712541393IPR029069HotDog domain
SuperFamilySSF546373.47E-3912571393IPR029069HotDog domain
CDDcd034443.91E-3912901392No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 1406 aa     Download sequence    Send to blast
MGLNVYCPHI DPKQHFLGTG AYYEWVYSGG IPSPGETPFL CYFTWQGASH STDLCVPDKD  60
TGCEFADWEI KLNGLCRYFG AGPGAYLART PRSCQVPKHA RLRTHDTSEN QPRETHLACF  120
TRSHARTPDT FRSALPFPDL DPAGFLPFAI DHAGSPRRSP GIAVPDGALK IPSRRRGICR  180
RIRHLQRVFD LEACEIPEDM VFLRLVGTSE DDEEMGMDVK DEDDEDDDYE ENGGEQGNAS  240
VSGMVEIDDG NGIGTATGDN RFQQHQQFQE QVGTPGGGTR RSRPLEEKER TKLRERRRRA  300
ITARILAGLR RHGNYNLRVR ADINDVIAAL AREAGWVVLP DGSTFPSRSQ GQKPAGGNST  360
IVTSSSSLAA SQQTPSASLR GVASGYRSPL EYNACQTKGV FMPTPSPYDL SSSSRSQTSM  420
VGDGEAQRDN RPLIAGSMDN ADDKQIADLP PRLPERDLAG TPYVPVYVML SLGVINIKCE  480
LVDPDGLLKQ LRVLKSVHVD GVMVDCWWGI VEAHAPQEYN WNGYKRLFQM VRELKLKLQV  540
VISFHECGGN FGDDVCIPLP HWVAEIGRSN PDIFFTDKEG RHNPECLSWG IDKERVLRGR  600
TAVEVYFDFM RSFRVEFDEY FEDGFISMIE IGLGPCGELR YPSCPVKHGW RYPGVGEFQC  660
YDQYMLKSLR KAAEVRGHSI WARGPDNAGT YNSQPHETGF FCDGGDYDGF YGRFFLSWYS  720
QVLVDHGNRV LSLAKLAFEG SCIAAKTIGV SLNIPCVDLH TFNQQHEGFP ETFADPEGIV  780
WQLLNAGWDV DLPVTGQNGF PCLNRVGYNK VLDNAKPMND PDGRLFSSFT YLRLSPLLME  840
QQNFVEFERF VKRMHGEAVL DLQNRRNRIV ICCGTYFVRV PRERSSATEA TWLVCAEDIR  900
TCDSQTLCKL PVVSLQTLPK VAVDIFRGIT PPDVPKFGKV FGGQIVGQAL AAASKSVDCL  960
KVVYSLHAYF LLVGDFNKGR SRVSPPGSVY PIGPFHFQVF EFLGNVPLLQ RLPGSSVRKI  1020
SELVILKHYE PGEYVVREGE RGDGLYFIWE GELSDLQAEV VGSVNADDDN HPEFQLKRFD  1080
YFGFGLSNEV HHADVVALTK LSCLVLPHEH SALLQPKSIW SAEKSHDTCS LVEHILHLDP  1140
IEVDIFRGIT PPDAPTFGKV FGGQIVGQAL AAASKSVDCR KVVHSLHVYF LLVGDFNIPI  1200
IYQVKRLRDG KSFATRKVDA IQKGNVIFTL LASFHLLSLE ELREQRLTDP RLPRTYRNKV  1260
ATIEFIPWPI EIRFCEPKIS TNQTKSPPSL RYWFRARGKL SDDQALHRCV VAYTSDLIFL  1320
QVSLNPNRRK GRKARAVSLD HSMWFHRPLR ADDWILFVIF SPTANNARGY VTGQMFNQKG  1380
EHLVSVVQEG VMREVISAKS AIKSNL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1v3i_A1e-11146385711444Beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN29360.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2P5XL000.0A0A2P5XL00_GOSBA; Beta-amylase
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]