PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN31462.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 394aa    MW: 42744.4 Da    PI: 7.4754
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN31462.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.97.1e-16205260459
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                  kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L +eN++L k+    ++++++ 
  KHN31462.1 205 AKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRSENSSLLKRFTDVSQKYSNA 260
                 79*****************************************9999888888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-19202266IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.576204256IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.9E-12204257No hitNo description
PfamPF001702.9E-13205258IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.63E-12206257No hitNo description
PROSITE patternPS000360209224IPR004827Basic-leucine zipper domain
PfamPF124981.9E-44273386IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000165Biological ProcessMAPK cascade
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005622Cellular Componentintracellular
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004707Molecular FunctionMAP kinase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MERVLSVDEI SEQYWVAASS SSSSSSSSFK SKMNRSESEW AFQQFLQQEA ASSSSNSDHD  60
DDHHHAKLKK ESNTNIPVTL HVDSQDYHAI LKTKLNLACA AVAMTRGSLV KSQNPDSGPQ  120
ASNFSEVGSH ATLKGSGPFG NDDPSKLQNK DIKAQIGIPS SPSMQNKSAV VAMRPTISGS  180
SGEQSDDEEA EGEINMTGNM TPVDAKRVRR MLSNRESARR SRRRKQAHLT ELETQVSQLR  240
SENSSLLKRF TDVSQKYSNA AVDNRVLKAD VETLRAKVKM AEETVKRITG LSPMLHAMTE  300
MSSLGMPLFD ESPSETSADA AVPVQEDPNH HLCQPTSNNG LGGISSIETV QQNVAAVVGG  360
NKMGRTTSLH RVASLEHLQK RIRGGADSRG TPSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218225RRSRRRKQ
2220225SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN31462.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0932530.0BT093253.1 Soybean clone JCVI-FLGm-24C5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237113.20.0bZIP transcription factor bZIP105
RefseqXP_028226695.10.0light-inducible protein CPRF2-like
SwissprotQ990901e-111CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A0B2RI270.0A0A0B2RI27_GLYSO; Light-inducible protein CPRF2
TrEMBLA0A445LGN20.0A0A445LGN2_GLYSO; Light-inducible protein CPRF2 isoform A
TrEMBLI1JRM90.0I1JRM9_SOYBN; Uncharacterized protein
STRINGGLYMA03G40730.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.29e-64bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]