PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN31557.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 431aa    MW: 48735.5 Da    PI: 9.633
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN31557.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.7e-123180455
                HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                +h+e Er+RR+++ +   +Lr+llP       ++K s ++ + +A++YI++Lq
  KHN31557.1 31 MHKETERQRRQEMGNLCTTLRSLLPLeY---IKGKRSTSDHVNEAMNYINHLQ 80
                7*************************77...*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.49E-112584No hitNo description
SuperFamilySSF474593.53E-152696IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.6872779IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.7E-112995IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-93180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.9E-53385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5001131.962145424IPR000719Protein kinase domain
SMARTSM002204.1E-17146424IPR000719Protein kinase domain
PfamPF077141.2E-38175422IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
Gene3DG3DSA:3.30.200.209.6E-13176231No hitNo description
SuperFamilySSF561122.83E-66177426IPR011009Protein kinase-like domain
CDDcd140661.13E-93178426No hitNo description
Gene3DG3DSA:1.10.510.105.8E-43234426No hitNo description
PROSITE patternPS001080275287IPR008271Serine/threonine-protein kinase, active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MARRNSGKHL LVGEKEDYNK LAMDDENKKW MHKETERQRR QEMGNLCTTL RSLLPLEYIK  60
GKRSTSDHVN EAMNYINHLQ SKVKQLQAKR DELVKVSNLM SNICPENIES SSTIHLPPLV  120
SIHPFPGGLE IMCSYSFGKS LFPMSRVLDI LLKEGINVVS TTSIRRDGRF IHTIRSEIAV  180
KRLKTMTAKA EMEFAVEVEV LGRVRHKNLL GLRGFYAGGD ERLIVYDYMP NHSLLTHLHG  240
PLAKKCQLDW PRRMSIAIGT AEGLAYLHHE STPHIIHRDI KASNVLLDAE FQAKVADFGF  300
AKLVPDGVTH LTTKVKGTLG YLAPEYAMWG KVSESCDVYS FGILLLEIIS AKKPIEKFPG  360
EVKRDIVQWV TPYINKGLFN NIADPKLKGK FDLEQLKNVT TIALRCTDSS ADKRPSMKEV  420
VDWLKNGVGN T
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3tl8_A3e-6317842665316BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3tl8_D3e-6317842665316BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3tl8_G3e-6317842665316BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3tl8_H3e-6317842665316BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3uim_A1e-6317842657308BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3ulz_A1e-6317842657308BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN31557.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0927390.0BT092739.1 Soybean clone JCVI-FLGm-11L13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014624290.10.0PTI1-like tyrosine-protein kinase At3g15890
RefseqXP_014624291.10.0PTI1-like tyrosine-protein kinase At3g15890
RefseqXP_014624292.10.0PTI1-like tyrosine-protein kinase At3g15890
RefseqXP_028206713.10.0PTI1-like tyrosine-protein kinase At3g15890
RefseqXP_028206714.10.0PTI1-like tyrosine-protein kinase At3g15890
RefseqXP_028206715.10.0PTI1-like tyrosine-protein kinase At3g15890
SwissprotQ9LSC29e-86Y3589_ARATH; PTI1-like tyrosine-protein kinase At3g15890
TrEMBLA0A0B2RIB50.0A0A0B2RIB5_GLYSO; PTI1-like tyrosine-protein kinase
STRINGGLYMA16G32600.60.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF710033
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.14e-32bHLH family protein
Publications ? help Back to Top
  1. Marmagne A, et al.
    A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome.
    Mol. Cell Proteomics, 2007. 6(11): p. 1980-96
    [PMID:17644812]
  2. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]