PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN31613.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 417aa    MW: 44849.2 Da    PI: 6.658
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN31613.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.55.1e-22308370163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e+++++ e+++l+se+
  KHN31613.1 308 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENATLRSEVSQIRSEYEQLRSEN 370
                 89***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.8E-29196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.7E-54135275No hitNo description
Gene3DG3DSA:1.20.5.1706.9E-19302368No hitNo description
PfamPF001706.1E-21308370IPR004827Basic-leucine zipper domain
SMARTSM003386.4E-23308372IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.955310373IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.44E-11311368No hitNo description
CDDcd147024.39E-24313363No hitNo description
PROSITE patternPS000360315330IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MGSSDMDKTP KEKESKTPPA TSQEQSSTTA MPTTNPDWSN FQTYSPIPPH GFLASSPQAH  60
PYMWGIQHYM PPYGTPPHPY VAMYPHGGIY AHPSIPPGSY PFSPFAMASP NGIADASGNA  120
PGRIEVGGKP PEVKEKLPIK RSKGSASGGN LNMWITGKNN EPGKIPGESA NGIHSKSGES  180
ASDGTSEGSD ENSQNDSQLK SRERQDSFED EPSQNGSSVH APQNGVHNRP QTVVNQTMSI  240
LPISTTSAPG AVPGPTTNLN IGMDYWGTPT SSTIPALHGK VPSTAVAGGM IAAGSRDGVQ  300
SQVWLQDERE LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEALKEENA TLRSEVSQIR  360
SEYEQLRSEN AALKERLGDI PGVATPGKED LRSGQNDQHV SNDTQQSGQT EVVQGVH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1324330RRSRLRK
2324331RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN31613.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF3697900.0AF369790.1 Phaseolus vulgaris bZIP transcription factor 2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006585866.10.0bZIP transcription factor 16 isoform X1
RefseqXP_028245300.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_028245301.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_028245302.10.0bZIP transcription factor 16-like isoform X1
SwissprotQ501B21e-156BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A0B2RI210.0A0A0B2RI21_GLYSO; Transcription factor HBP-1a
STRINGGLYMA08G34280.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40173256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-156basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]