PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN31696.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family MYB_related
Protein Properties Length: 143aa    MW: 16276.2 Da    PI: 6.7819
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN31696.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.6e-0876121447
                      S-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqky 47 
                      WT+e +  ++ + ++ G g   Wk+I+ ++ + +tl q++s+ qky
       KHN31696.1  76 WTKEHHMSFLLGLEKCGQGeeKWKKISTYFLTSKTLTQIVSHVQKY 121
                      *********************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.03E-1271125IPR009057Homeodomain-like
TIGRFAMsTIGR015572.6E-1174125IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.603.0E-574124IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MEAPKYDNGS NDESSSSTPS FSNNQEDQEE PLVPGGFSNP LKTHDSYNIE EANCIMLSGG  60
SDDSSVSLCC QKYTHWTKEH HMSFLLGLEK CGQGEEKWKK ISTYFLTSKT LTQIVSHVQK  120
YFLRKNVPEK GRRRRSIHDM IPL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN31696.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028214831.14e-23uncharacterized protein LOC114396841
TrEMBLK7MQF51e-103K7MQF5_SOYBN; Uncharacterized protein
STRINGGLYMA18G08171.11e-104(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3655122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-18MYB family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]