PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN32361.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 144aa    MW: 15900.3 Da    PI: 9.7156
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN32361.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.21.9e-0533721054
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                + R ++i +++  L++l+ +      +K + +++L++A+eYI  L
  KHN32361.1 33 KERKEKIGERIVALQQLVSPY-----GKTDTSSVLKEAMEYIGFL 72
                789999************999.....9***************887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.105.6E-102287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.6552372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.03E-112486IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00292978IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.33E-53377No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MMEHKRRPCS VDQSSYTSIA SKRQKADLSI STKERKEKIG ERIVALQQLV SPYGKTDTSS  60
VLKEAMEYIG FLHKQVKLLS APYLESSPAA KMQGVEPCSL RSRGLCLVPV SVTIGVAESN  120
GADIWAPIKT TTSPKFEKDV SQFH
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN32361.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0310980.0KT031098.1 Glycine max clone HN_CCL_42 bHLH transcription factor (Glyma02g15520.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001235597.11e-103uncharacterized LOC100527660
RefseqXP_028205467.11e-103transcription factor bHLH153-like isoform X1
SwissprotQ7XJU27e-59BH153_ARATH; Transcription factor bHLH153
TrEMBLA0A0B2RD651e-102A0A0B2RD65_GLYSO; Transcription factor bHLH113
TrEMBLA0A445LNQ01e-101A0A445LNQ0_GLYSO; Transcription factor bHLH153 isoform A
TrEMBLC6T5091e-101C6T509_SOYBN; BHLH transcription factor
STRINGGLYMA02G15520.11e-102(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108133138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.53e-61bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]