PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN33480.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 181aa    MW: 20999.3 Da    PI: 10.0709
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN33480.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.59e-165192445
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                l+++rr++kNRe+A rsR+RK+a++ eLe  v  Le+eN  L
  KHN33480.1 51 LQKQRRMIKNRESAARSRERKQAYTVELESLVTHLEEENAVL 92
                89*************************************866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-1048112IPR004827Basic-leucine zipper domain
PfamPF001703.8E-135093IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.0255092IPR004827Basic-leucine zipper domain
CDDcd147071.33E-165295No hitNo description
SuperFamilySSF579592.19E-105297No hitNo description
Gene3DG3DSA:1.20.5.1703.2E-135397No hitNo description
PROSITE patternPS0003605570IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MAEVVAGTES EDNMSMSMSL QDLLGSHSHG GRRVKRKSVV EEPLVVDKVT LQKQRRMIKN  60
RESAARSRER KQAYTVELES LVTHLEEENA VLLQLAADRK RLRLNQLMEC LIPVEEKRKP  120
KRMLRRVNSS QWISLGVTLL YREIMQLNNS TNLIQAEAYY WFTRWRIPEL MDIAGIGGNY  180
V
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN33480.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0922843e-91BT092284.1 Soybean clone JCVI-FLGm-10F13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028203399.11e-89G-box-binding factor 4-like
SwissprotP427771e-25GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A445GPJ32e-88A0A445GPJ3_GLYSO; G-box-binding factor 4
STRINGGLYMA15G05440.12e-84(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.15e-31bZIP family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]