PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KHN34586.1

Organism

Glycine soja

Taxonomic ID

3848

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 320aa MW: 35243.2 Da PI: 7.3228

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN34586.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.9	6.9e-16	250	294	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r++r++kNRe+A rsR+RK+a+++eLe kv +Le+eN++L+ ++ KHN34586.1 250 RRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEEENERLRRQN 294 79****************************************765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.5E-14	243	295	No hit	No description
SMART	SM00338	1.3E-14	246	314	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.679	248	293	IPR004827	Basic-leucine zipper domain
CDD	cd14707	9.04E-25	250	295	No hit	No description
SuperFamily	SSF57959	1.25E-11	250	296	No hit	No description
Pfam	PF00170	3.8E-13	250	295	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	253	268	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence Send to blast
MGSQGGTTQD QEPKTGSLTR QGSLYNLTLD EVQNQLGNLG KPLGSMNLDE LLKSVWTAES 60 GTDAYMQHGG QVASAGSSLN PQGSLTLSGN LSKKTIDEVW RDMQQKKSVG KERQPTLGEM 120 TLEDFLVKAG VATEPFPNED GAMAMSGVDS QHNTSQHAHW MQYQLTSVQQ QPQQQQHQHQ 180 NQQNSVMLGF SGFMTGHAVQ QPIPIVVNTV LDAGYSEALP SSLMGALSDS QTAGRKRDAS 240 GNVVEKTVER RQKRMIKNRE SAARSRARKQ AYTQELEIKV SQLEEENERL RRQNEIERAL 300 PSAPPPDPKH QLRRTSSAPL

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN34586.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015037	0.0	AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028218973.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-103	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A445FFL2	0.0	A0A445FFL2_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform A
STRING	GLYMA19G30230.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1320	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	2e-91	ABA-responsive element binding protein 3

Publications ? help Back to Top
Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]